BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038H07LP1|AL430620
(818 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1468 1535 0.0
>3x_Contig1468
Length = 9852
Score = 1535 bits (772), Expect = 0.0
Identities = 799/806 (99%), Gaps = 3/806 (0%)
Strand = Plus / Minus
Query: 1 atactaagtcatccaaartacttattgtcgagggaaacaggttcgatagtaacgggttta 60
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2654 atactaagtcatccaaagt-cttattgtcgagggaaacaggttcgatagtaacgggttta 2596
Query: 61 gtagatgtctttgttccagttgtagtttcctgcttagcactttcagttgtttctttggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2595 gtagatgtctttgttccagttgtagtttcctgcttagcactttcagttgtttctttggta 2536
Query: 121 gtatccggtttcagaccgcccaaagaaaaggaaggagcttcagttttcgtgtctttggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2535 gtatccggtttcagaccgcccaaagaaaaggaaggagcttcagttttcgtgtctttggaa 2476
Query: 181 gcggtagtttccgcag-tttacttccaaagctaaaarcaggctttgaatcaaccttagtg 239
|||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2475 gcggtagtttccgcaggtttacttccaaagctaaaagcaggctttgaatcaaccttagtg 2416
Query: 240 tcagatgttctgctatcggcaggtttacttccaaagctaaatgcaggcttcgaatcgtcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2415 tcagatgttctgctatcggcaggtttacttccaaagctaaatgcaggcttcgaatcgtcc 2356
Query: 300 ttagtatcagatgatttgctatcggtaggtttcgctcctaacgagaatgcggggctagga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2355 ttagtatcagatgatttgctatcggtaggtttcgctcctaacgagaatgcggggctagga 2296
Query: 360 tcggctttattttctgaggtgttggaccctaaagcaaaakatggttttgattctgacttt 419
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2295 tcggctttattttctgaggtgttggaccctaaagcaaaagatggttttgattctgacttt 2236
Query: 420 gacccgtcagtcttgttatcgaacgaaaaggccgctttggaagctgacttggtatcttca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2235 gacccgtcagtcttgttatcgaacgaaaaggccgctttggaagctgacttggtatcttca 2176
Query: 480 gtcttattgccaaaagaaaacccaggcttggattcggtatcgtcagcattcgtgttcaag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2175 gtcttattgccaaaagaaaacccaggcttggattcggtatcgtcagcattcgtgttcaag 2116
Query: 540 gatcccagagaaaatcccattttagaggcaggtttagattcttctgttttagatcccaga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2115 gatcccagagaaaatcccattttagaggcaggtttagattcttctgttttagatcccaga 2056
Query: 600 gaaaatccacttttggtctcctctttactgttgccagatttaacattgaatgcaaaaccc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2055 gaaaatccacttttggtctcctctttactgttgccagatttaacattgaatgcaaaaccc 1996
Query: 660 tgtttactttctggtttgtcattgggaaggtttagagggttcaggagccactggttttga 719
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1995 tgtttactttctggtttgtcatt-ggaaggtttagagggttcaggagccactggttttga 1937
Query: 720 tccaaagctgaaggctggcttaccggcttgttctgtcccagaggtctttgctccgaaaga 779
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1936 tccaaagctgaaggctggcttaccggcttgttctgtcccagagggctttgctccgaaaga 1877
Query: 780 aaatgctggtttagcatctgtaggct 805
||||||||||||||||||||||||||
Sbjct: 1876 aaatgctggtttagcatctgtaggct 1851
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5180
Number of Sequences: 1807
Number of extensions: 5180
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 818
length of database: 10,358,551
effective HSP length: 16
effective length of query: 802
effective length of database: 10,329,639
effective search space: 8284370478
effective search space used: 8284370478
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)